Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.92□□□□□ -1.46
Cdx2P43241 Gm22300-201ENSMUST00000082661 126 ntBASIC5.92□□□□□ -1.46
Cdx2P43241 Mir143-201ENSMUST00000083511 63 ntBASIC5.92□□□□□ -1.46
Cdx2P43241 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.92□□□□□ -1.46
Cdx2P43241 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
Cdx2P43241 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.92□□□□□ -1.46
Cdx2P43241 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.92□□□□□ -1.46
Cdx2P43241 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.92□□□□□ -1.46
Cdx2P43241 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.92□□□□□ -1.46
Cdx2P43241 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx2P43241 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm16423-201ENSMUST00000120078 947 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm12399-201ENSMUST00000121475 446 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm12396-201ENSMUST00000121600 306 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm6808-201ENSMUST00000162341 807 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.91□□□□□ -1.46
Cdx2P43241 Mir3095-201ENSMUST00000175552 87 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm37152-201ENSMUST00000193369 1175 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm37196-201ENSMUST00000194762 906 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm43946-201ENSMUST00000204058 886 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.91□□□□□ -1.46
Cdx2P43241 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm5830-201ENSMUST00000049117 443 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Cdx2P43241 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm8700-201ENSMUST00000222187 3054 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm15950-201ENSMUST00000162902 1973 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 AC103672.2-201ENSMUST00000228146 1687 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 Gm9894-201ENSMUST00000171257 2904 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdx2P43241 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.91□□□□□ -1.46
Cdx2P43241 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx2P43241 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cdx2P43241 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
Cdx2P43241 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cdx2P43241 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.9□□□□□ -1.46
Cdx2P43241 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Gm15233-201ENSMUST00000118747 400 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Gm14521-201ENSMUST00000119545 350 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Gm28467-201ENSMUST00000190981 318 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Gm37477-201ENSMUST00000195215 884 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Gm9480-201ENSMUST00000198038 616 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.9□□□□□ -1.46
Cdx2P43241 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx2P43241 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdx2P43241 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdx2P43241 Gm6477-201ENSMUST00000217098 764 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 Gm2614-201ENSMUST00000223227 403 ntBASIC5.9□□□□□ -1.46
Cdx2P43241 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms