Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm42541-201ENSMUST00000199871 2249 ntBASIC9.15□□□□□ -0.94
Chd1P40201 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chd1P40201 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC9.15□□□□□ -0.95
Chd1P40201 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Chd1P40201 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Chd1P40201 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Chd1P40201 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Chd1P40201 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Chd1P40201 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Gm13566-201ENSMUST00000117428 1142 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Gm11366-201ENSMUST00000119279 429 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Gm5387-201ENSMUST00000119776 857 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC9.14□□□□□ -0.95
Chd1P40201 Mir7087-201ENSMUST00000184840 70 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC9.14□□□□□ -0.95
Chd1P40201 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC9.14□□□□□ -0.95
Chd1P40201 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC9.14□□□□□ -0.95
Chd1P40201 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Chd1P40201 n-R5s180-201ENSMUST00000082770 106 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Chd1P40201 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 AC022682.2-202ENSMUST00000224394 3943 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chd1P40201 Grik1-209ENSMUST00000227986 2942 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 Gm14349-201ENSMUST00000137155 902 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Gm29551-201ENSMUST00000190913 698 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Gm19169-201ENSMUST00000220109 1246 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC9.14□□□□□ -0.95
Chd1P40201 AC126554.2-201ENSMUST00000223259 400 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Chd1P40201 Gm23514-201ENSMUST00000082827 130 ntBASIC9.14□□□□□ -0.95
Chd1P40201 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Gm10855-201ENSMUST00000100426 2541 ntBASIC9.13□□□□□ -0.95
Chd1P40201 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Ap5m1-208ENSMUST00000228238 3514 ntBASIC9.13□□□□□ -0.95
Chd1P40201 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.13□□□□□ -0.95
Chd1P40201 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC9.13□□□□□ -0.95
Chd1P40201 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Gm6134-201ENSMUST00000117265 171 ntBASIC9.13□□□□□ -0.95
Chd1P40201 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Chd1P40201 Gm11759-201ENSMUST00000121742 464 ntBASIC9.13□□□□□ -0.95
Chd1P40201 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC9.13□□□□□ -0.95
Chd1P40201 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Gm18215-201ENSMUST00000204429 798 ntBASIC9.13□□□□□ -0.95
Chd1P40201 Glud-ps-201ENSMUST00000206310 657 ntBASIC9.13□□□□□ -0.95
Chd1P40201 AC165106.1-201ENSMUST00000227580 408 ntBASIC9.13□□□□□ -0.95
Chd1P40201 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chd1P40201 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Chd1P40201 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Chd1P40201 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC9.13□□□□□ -0.95
Chd1P40201 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Chd1P40201 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 AC110043.1-201ENSMUST00000220278 1627 ntBASIC9.12□□□□□ -0.95
Chd1P40201 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC9.12□□□□□ -0.95
Chd1P40201 CT010431.1-201ENSMUST00000221249 1080 ntBASIC9.12□□□□□ -0.95
Chd1P40201 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Chd1P40201 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC9.12□□□□□ -0.95
Chd1P40201 AC151984.1-201ENSMUST00000218261 2976 ntBASIC9.12□□□□□ -0.95
Chd1P40201 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chd1P40201 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Chd1P40201 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms