Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col4a1P02463 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Col4a1P02463 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Col4a1P02463 Gm42440-201ENSMUST00000197906 2284 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col4a1P02463 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col4a1P02463 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col4a1P02463 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
Col4a1P02463 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col4a1P02463 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Gm8545-201ENSMUST00000120692 801 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col4a1P02463 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col4a1P02463 Gm23546-201ENSMUST00000158211 137 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Col4a1P02463 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC7.37□□□□□ -1.23
Col4a1P02463 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col4a1P02463 Gm8039-201ENSMUST00000204758 712 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 Gm44132-201ENSMUST00000205142 151 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
Col4a1P02463 AC154436.2-201ENSMUST00000227408 208 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 AC118250.1-201ENSMUST00000228569 875 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Col4a1P02463 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col4a1P02463 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.37□□□□□ -1.23
Col4a1P02463 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Col4a1P02463 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col4a1P02463 CT009757.5-201ENSMUST00000221858 3425 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Col4a1P02463 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 AC122357.3-201ENSMUST00000221260 2293 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Col4a1P02463 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col4a1P02463 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Gm14871-201ENSMUST00000119056 194 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Gm24359-201ENSMUST00000158418 221 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Gm3008-201ENSMUST00000160566 571 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC7.36□□□□□ -1.23
Col4a1P02463 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Glud-ps-201ENSMUST00000206310 657 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Gm6009-201ENSMUST00000210848 280 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC7.36□□□□□ -1.23
Col4a1P02463 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC7.36□□□□□ -1.23
Col4a1P02463 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC7.36□□□□□ -1.23
Col4a1P02463 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.36□□□□□ -1.23
Col4a1P02463 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Col4a1P02463 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Gm6125-201ENSMUST00000217983 3472 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Col4a1P02463 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col4a1P02463 Gm44440-201ENSMUST00000203139 2373 ntBASIC7.36□□□□□ -1.23
Col4a1P02463 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm7700-201ENSMUST00000120273 970 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Gm11925-201ENSMUST00000121375 535 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col4a1P02463 Mir1963-201ENSMUST00000158594 59 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Mir3110-201ENSMUST00000175053 80 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Mir5103-201ENSMUST00000175111 79 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC7.35□□□□□ -1.23
Col4a1P02463 Gm37341-201ENSMUST00000194680 371 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Gm43516-201ENSMUST00000196891 322 ntBASIC7.35□□□□□ -1.23
Col4a1P02463 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col4a1P02463 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col4a1P02463 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms