Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm13818-201ENSMUST00000119441 511 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm12308-201ENSMUST00000120440 389 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm26381-201ENSMUST00000174895 92 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm5252-201ENSMUST00000189030 909 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm28116-201ENSMUST00000189064 387 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm22300-201ENSMUST00000082661 126 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm11346-201ENSMUST00000118346 704 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm25913-201ENSMUST00000157617 135 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm28654-201ENSMUST00000189801 379 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm20614-201ENSMUST00000177106 632 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm21856-201ENSMUST00000187547 696 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm23238-201ENSMUST00000083007 164 ntBASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a3E9PWQ3 Gm8534-201ENSMUST00000118553 766 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm14842-201ENSMUST00000119577 269 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm25293-201ENSMUST00000122792 285 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm23082-201ENSMUST00000157852 133 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Mir7012-201ENSMUST00000183900 64 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm2622-201ENSMUST00000200018 471 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm44650-201ENSMUST00000206929 194 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms