Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Mir6963-201ENSMUST00000183535 71 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Mir6417-201ENSMUST00000183815 116 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Mir7031-201ENSMUST00000183860 65 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm28973-201ENSMUST00000189310 613 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm37024-201ENSMUST00000192224 868 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm44683-201ENSMUST00000209088 484 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC6.31□□□□□ -1.4
Col4a6B1AVK5 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm12115-201ENSMUST00000119969 447 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm25489-201ENSMUST00000158727 141 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm44316-201ENSMUST00000199274 97 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm18705-201ENSMUST00000215985 913 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm8412-201ENSMUST00000077493 440 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 AC107453.4-201ENSMUST00000227068 1817 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm8501-201ENSMUST00000117684 432 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm12308-201ENSMUST00000120440 389 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm13740-201ENSMUST00000120590 310 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm26312-201ENSMUST00000157769 165 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms