Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm22781-201ENSMUST00000104083 137 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm13732-201ENSMUST00000117753 535 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm13739-201ENSMUST00000118020 530 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm7700-201ENSMUST00000120273 970 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm15242-201ENSMUST00000122459 283 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC5.62□□□□□ -1.51
CtcflA2APF3 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.62□□□□□ -1.51
CtcflA2APF3 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm20691-201ENSMUST00000176889 333 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC5.62□□□□□ -1.51
CtcflA2APF3 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm37477-201ENSMUST00000195215 884 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.62□□□□□ -1.51
CtcflA2APF3 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm42799-201ENSMUST00000201331 328 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm17822-201ENSMUST00000204307 351 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm18559-201ENSMUST00000208249 604 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm17994-201ENSMUST00000209260 533 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC5.62□□□□□ -1.51
CtcflA2APF3 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.62□□□□□ -1.51
CtcflA2APF3 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm9874-202ENSMUST00000194957 1464 ntBASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CtcflA2APF3 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CtcflA2APF3 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CtcflA2APF3 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.61□□□□□ -1.51
CtcflA2APF3 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CtcflA2APF3 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm14865-201ENSMUST00000117523 494 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm11212-201ENSMUST00000118337 618 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm7058-201ENSMUST00000119209 902 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm26321-201ENSMUST00000157740 242 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm6434-201ENSMUST00000163316 372 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm24157-201ENSMUST00000175265 111 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Mir6908-201ENSMUST00000184056 63 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm27193-201ENSMUST00000184217 586 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Mir6362-201ENSMUST00000184329 107 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm28885-201ENSMUST00000185615 563 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC5.61□□□□□ -1.51
CtcflA2APF3 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CtcflA2APF3 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CtcflA2APF3 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm3678-201ENSMUST00000218888 492 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.61□□□□□ -1.51
CtcflA2APF3 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CtcflA2APF3 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.61□□□□□ -1.51
CtcflA2APF3 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.61□□□□□ -1.51
CtcflA2APF3 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CtcflA2APF3 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CtcflA2APF3 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CtcflA2APF3 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CtcflA2APF3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CtcflA2APF3 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CtcflA2APF3 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms