Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm15161-201ENSMUST00000117340 387 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm2288-201ENSMUST00000118560 638 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm15361-201ENSMUST00000119320 444 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm11797-201ENSMUST00000121336 754 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm12778-201ENSMUST00000122341 333 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm20690-201ENSMUST00000177341 315 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm25617-201ENSMUST00000179548 133 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Mir6987-201ENSMUST00000184789 73 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm25617-202ENSMUST00000198387 132 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm44896-201ENSMUST00000206190 772 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm44809-201ENSMUST00000208305 993 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm7769-201ENSMUST00000212900 933 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 AC153975.1-201ENSMUST00000220087 926 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm31711-201ENSMUST00000220687 196 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 AC131743.3-201ENSMUST00000222099 662 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm23054-201ENSMUST00000082804 162 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx56Q9D0R4 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm24173-201ENSMUST00000104130 128 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm13444-201ENSMUST00000119445 522 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm11510-201ENSMUST00000120278 347 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm3025-201ENSMUST00000163454 489 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm3077-201ENSMUST00000165903 627 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm2878-201ENSMUST00000170173 486 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm27295-201ENSMUST00000184264 153 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm21524-201ENSMUST00000190499 696 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm37620-201ENSMUST00000192910 501 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.91□□□□□ -1.3
Ddx56Q9D0R4 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms