Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Dalir-201ENSMUST00000188773 2170 ntBASIC7.59□□□□□ -1.2
Clp1Q99LI9 Gm42534-201ENSMUST00000196063 1754 ntBASIC7.59□□□□□ -1.2
Clp1Q99LI9 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Clp1Q99LI9 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 AC154347.1-201ENSMUST00000221358 3105 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 AC130219.1-201ENSMUST00000228406 3433 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm26340-201ENSMUST00000102365 99 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm22426-201ENSMUST00000103811 96 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm13878-201ENSMUST00000117986 577 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm11343-201ENSMUST00000120579 599 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm13471-201ENSMUST00000122057 433 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm15164-201ENSMUST00000122203 271 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm24228-201ENSMUST00000158829 129 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm6921-201ENSMUST00000161478 435 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm21241-201ENSMUST00000179551 934 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm27602-201ENSMUST00000183861 111 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Mir6911-201ENSMUST00000184241 69 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm18181-201ENSMUST00000190670 736 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm38022-201ENSMUST00000191762 403 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm17771-201ENSMUST00000194477 1147 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm36986-201ENSMUST00000195320 353 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm18340-201ENSMUST00000196342 609 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm5711-201ENSMUST00000197896 421 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm2142-201ENSMUST00000197899 589 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm17893-201ENSMUST00000203017 770 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm44449-201ENSMUST00000203610 153 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm45626-201ENSMUST00000210093 361 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm4042-201ENSMUST00000216946 637 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm6477-201ENSMUST00000217098 764 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm20302-201ENSMUST00000080671 275 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC7.58□□□□□ -1.2
Clp1Q99LI9 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clp1Q99LI9 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm43621-201ENSMUST00000202733 2022 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 AC160029.1-201ENSMUST00000219628 2678 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm25785-201ENSMUST00000104129 125 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm15349-201ENSMUST00000121154 204 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm14251-201ENSMUST00000122133 279 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm15242-201ENSMUST00000122459 283 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm24383-201ENSMUST00000122691 333 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm22428-201ENSMUST00000158554 132 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm3339-201ENSMUST00000163462 475 ntBASIC7.57□□□□□ -1.2
Clp1Q99LI9 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms