Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm43092-201ENSMUST00000202986 1854 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 2010109I03Rik-201ENSMUST00000077004 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm23840-201ENSMUST00000116950 97 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm14711-201ENSMUST00000117056 217 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm14279-201ENSMUST00000117142 332 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm7485-201ENSMUST00000119502 1109 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm12322-201ENSMUST00000121605 389 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm11897-201ENSMUST00000121976 828 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm25837-201ENSMUST00000158919 108 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 A230009B12Rik-201ENSMUST00000159422 898 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Trp53-ps-201ENSMUST00000166597 141 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm4252-201ENSMUST00000174823 313 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm25190-201ENSMUST00000176664 95 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm27342-201ENSMUST00000183530 109 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm17981-201ENSMUST00000191109 739 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm7115-201ENSMUST00000193706 832 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Igkv12-42-201ENSMUST00000198769 327 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm7751-201ENSMUST00000212868 709 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm2829-201ENSMUST00000213121 499 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm18903-201ENSMUST00000215343 480 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm4739-201ENSMUST00000218296 633 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Rybp-ps-201ENSMUST00000069489 681 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm26132-201ENSMUST00000083166 148 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm22830-201ENSMUST00000083772 130 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm44667-201ENSMUST00000207632 3337 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm13340-201ENSMUST00000117219 1545 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Cyp4a29-201ENSMUST00000118278 1530 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Pcdhb3Q91XZ7 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms