Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm25345-201ENSMUST00000104505 133 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm14836-201ENSMUST00000118567 471 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm14970-201ENSMUST00000122289 355 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm22276-201ENSMUST00000122469 129 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm26372-201ENSMUST00000157831 236 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm26738-201ENSMUST00000181312 601 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm7832-201ENSMUST00000202613 880 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm42679-201ENSMUST00000197086 2906 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm43189-201ENSMUST00000196040 3069 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Grik1-209ENSMUST00000227986 2942 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm13811-201ENSMUST00000117800 256 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm14115-201ENSMUST00000119242 482 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm14098-201ENSMUST00000119295 623 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm18343-201ENSMUST00000172802 604 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Gm2614-201ENSMUST00000223227 403 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col6a6Q8C6K9 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.52
Col6a6Q8C6K9 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 AC107453.4-201ENSMUST00000227068 1817 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm3883-201ENSMUST00000098119 3229 ntBASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Col6a6Q8C6K9 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms