Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm26376-201ENSMUST00000104784 110 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm14870-201ENSMUST00000118414 156 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm12074-201ENSMUST00000120189 219 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm27004-201ENSMUST00000183300 727 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm19936-201ENSMUST00000216414 838 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm23459-201ENSMUST00000083259 131 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 AC158986.1-201ENSMUST00000228391 3455 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm11561-201ENSMUST00000117429 417 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm12641-201ENSMUST00000117874 985 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm37908-201ENSMUST00000195828 470 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm17918-201ENSMUST00000205315 574 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.74□□□□□ -1.49
Spg11Q3UHA3 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm43534-201ENSMUST00000197685 2853 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm14485-201ENSMUST00000119489 493 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm12402-201ENSMUST00000120536 334 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm2053-201ENSMUST00000195671 631 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 AC153955.4-201ENSMUST00000217069 2752 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm16082-201ENSMUST00000115992 377 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm11805-201ENSMUST00000121238 600 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm11759-201ENSMUST00000121742 464 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm17223-201ENSMUST00000171413 481 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm27970-201ENSMUST00000184854 407 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm37376-201ENSMUST00000192176 453 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Gm44048-201ENSMUST00000204531 361 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 AC159193.3-201ENSMUST00000221902 2622 ntBASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Spg11Q3UHA3 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Gm3883-201ENSMUST00000098119 3229 ntBASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Gm2762-207ENSMUST00000202739 2665 ntBASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Gm13259-201ENSMUST00000120792 456 ntBASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Gm24628-201ENSMUST00000122761 289 ntBASIC5.72□□□□□ -1.49
Spg11Q3UHA3 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Spg11Q3UHA3 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms