Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.36□□□□□ -1.39
Usp39Q3TIX9 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp39Q3TIX9 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp39Q3TIX9 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Robo2-210ENSMUST00000226478 8059 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm23768-201ENSMUST00000104440 131 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm15310-201ENSMUST00000117891 372 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm15048-201ENSMUST00000118201 954 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm11483-201ENSMUST00000119839 247 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm12175-201ENSMUST00000122081 345 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm22728-201ENSMUST00000158087 129 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm9672-201ENSMUST00000166437 425 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm27360-201ENSMUST00000183487 80 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm18356-201ENSMUST00000185677 623 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm38214-201ENSMUST00000192581 988 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm412-201ENSMUST00000193360 948 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm37993-201ENSMUST00000195301 988 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm9357-201ENSMUST00000207138 805 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm35619-201ENSMUST00000222548 600 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 AV026068-218ENSMUST00000223980 575 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp39Q3TIX9 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Gm22284-201ENSMUST00000104132 132 ntBASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Gm15754-201ENSMUST00000119191 478 ntBASIC6.34□□□□□ -1.39
Usp39Q3TIX9 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms