Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm36965-201ENSMUST00000193797 394 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.66□□□□□ -1.34
Msx2Q03358 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm42580-201ENSMUST00000197223 753 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Gm29745-201ENSMUST00000198005 687 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Mir1897-202ENSMUST00000198006 79 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msx2Q03358 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm6230-201ENSMUST00000208077 780 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.66□□□□□ -1.34
Msx2Q03358 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Gm7639-201ENSMUST00000212608 484 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.66□□□□□ -1.34
Msx2Q03358 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm4796-201ENSMUST00000219802 624 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Gm5791-201ENSMUST00000220840 489 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.66□□□□□ -1.34
Msx2Q03358 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 AC130823.2-201ENSMUST00000226169 290 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 AC140208.1-201ENSMUST00000226609 285 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Olfr1255-201ENSMUST00000057369 933 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Gm25739-201ENSMUST00000082886 107 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 n-R5s196-201ENSMUST00000083136 117 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msx2Q03358 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msx2Q03358 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.66□□□□□ -1.34
Msx2Q03358 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Msx2Q03358 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Msx2Q03358 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msx2Q03358 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
Msx2Q03358 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Msx2Q03358 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Msx2Q03358 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
Msx2Q03358 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.65□□□□□ -1.34
Msx2Q03358 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
Msx2Q03358 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.65□□□□□ -1.34
Msx2Q03358 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Msx2Q03358 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Msx2Q03358 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Msx2Q03358 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Msx2Q03358 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
Msx2Q03358 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Gm11880-201ENSMUST00000117612 399 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gm11207-201ENSMUST00000117824 414 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gm13454-201ENSMUST00000118166 483 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gm13484-201ENSMUST00000120738 412 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gm13440-201ENSMUST00000121665 496 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gm12103-201ENSMUST00000121892 362 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC6.65□□□□□ -1.34
Msx2Q03358 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.65□□□□□ -1.34
Msx2Q03358 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Mir6409-201ENSMUST00000184957 92 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gm29263-201ENSMUST00000188718 463 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gm29435-201ENSMUST00000191310 689 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC6.65□□□□□ -1.34
Msx2Q03358 Gm43954-201ENSMUST00000204634 544 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Msx2Q03358 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.65□□□□□ -1.34
Msx2Q03358 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Msx2Q03358 Rpl32l-201ENSMUST00000216127 399 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 AC121844.1-201ENSMUST00000218706 137 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 AC153975.1-201ENSMUST00000220087 926 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.65□□□□□ -1.34
Msx2Q03358 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Msx2Q03358 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms