Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Col8a1Q00780 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Gm18716-201ENSMUST00000204507 1603 ntBASIC6□□□□□ -1.45
Col8a1Q00780 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col8a1Q00780 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6□□□□□ -1.45
Col8a1Q00780 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6□□□□□ -1.45
Col8a1Q00780 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6□□□□□ -1.45
Col8a1Q00780 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6□□□□□ -1.45
Col8a1Q00780 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Col8a1Q00780 Gm24272-201ENSMUST00000102329 98 ntBASIC6□□□□□ -1.45
Col8a1Q00780 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col8a1Q00780 Gm14786-201ENSMUST00000117127 944 ntBASIC6□□□□□ -1.45
Col8a1Q00780 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6□□□□□ -1.45
Col8a1Q00780 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6□□□□□ -1.45
Col8a1Q00780 Gm23896-201ENSMUST00000158109 130 ntBASIC6□□□□□ -1.45
Col8a1Q00780 Gm26167-201ENSMUST00000158423 253 ntBASIC6□□□□□ -1.45
Col8a1Q00780 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC6□□□□□ -1.45
Col8a1Q00780 Rab26os-201ENSMUST00000176215 477 ntBASIC6□□□□□ -1.45
Col8a1Q00780 Gm20620-201ENSMUST00000177528 168 ntBASIC6□□□□□ -1.45
Col8a1Q00780 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col8a1Q00780 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col8a1Q00780 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6□□□□□ -1.45
Col8a1Q00780 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6□□□□□ -1.45
Col8a1Q00780 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Gm42646-201ENSMUST00000202233 914 ntBASIC6□□□□□ -1.45
Col8a1Q00780 AC164424.3-201ENSMUST00000220809 148 ntBASIC6□□□□□ -1.45
Col8a1Q00780 AC166358.8-201ENSMUST00000223288 105 ntBASIC6□□□□□ -1.45
Col8a1Q00780 AC124739.1-201ENSMUST00000223433 148 ntBASIC6□□□□□ -1.45
Col8a1Q00780 AV026068-219ENSMUST00000224148 933 ntBASIC6□□□□□ -1.45
Col8a1Q00780 AC124395.1-201ENSMUST00000225940 707 ntBASIC6□□□□□ -1.45
Col8a1Q00780 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col8a1Q00780 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Mir365-2-201ENSMUST00000083555 112 ntBASIC6□□□□□ -1.45
Col8a1Q00780 Gm22578-201ENSMUST00000083730 107 ntBASIC6□□□□□ -1.45
Col8a1Q00780 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col8a1Q00780 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col8a1Q00780 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC6□□□□□ -1.45
Col8a1Q00780 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col8a1Q00780 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6□□□□□ -1.45
Col8a1Q00780 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col8a1Q00780 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm13772-201ENSMUST00000118431 317 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm15047-201ENSMUST00000118891 454 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm5387-201ENSMUST00000119776 857 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm5255-201ENSMUST00000120125 642 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm14070-201ENSMUST00000120773 428 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm8061-201ENSMUST00000122380 350 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm24840-201ENSMUST00000122603 147 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm10913-201ENSMUST00000133732 463 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms