Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PrkdcP97313 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PrkdcP97313 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm25278-201ENSMUST00000157267 120 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Gm24534-201ENSMUST00000157949 291 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm22993-201ENSMUST00000175423 254 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm26925-201ENSMUST00000182470 957 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm37653-201ENSMUST00000195401 3578 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 AC135083.2-201ENSMUST00000228599 1456 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm45520-201ENSMUST00000210109 2031 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PrkdcP97313 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm44225-201ENSMUST00000203582 186 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PrkdcP97313 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm45516-201ENSMUST00000211588 4182 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 CT030159.1-201ENSMUST00000221580 2261 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PrkdcP97313 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm42544-201ENSMUST00000197868 3242 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 CU062626.1-201ENSMUST00000225248 505 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
PrkdcP97313 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PrkdcP97313 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PrkdcP97313 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Gm29755-201ENSMUST00000196976 948 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 Gm31211-201ENSMUST00000199170 253 ntBASIC4.06□□□□□ -1.76
PrkdcP97313 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms