Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sox3P53784 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Sox3P53784 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6□□□□□ -1.45
Sox3P53784 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
Sox3P53784 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
Sox3P53784 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
Sox3P53784 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sox3P53784 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6□□□□□ -1.45
Sox3P53784 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Sox3P53784 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6□□□□□ -1.45
Sox3P53784 Gm38178-201ENSMUST00000194502 2471 ntBASIC6□□□□□ -1.45
Sox3P53784 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Gm43029-201ENSMUST00000201829 1535 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Gm23910-201ENSMUST00000104597 132 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Gm13428-201ENSMUST00000117540 365 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.99□□□□□ -1.45
Sox3P53784 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.99□□□□□ -1.45
Sox3P53784 Gm25824-201ENSMUST00000157092 121 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Gm26486-201ENSMUST00000158021 110 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Gm19560-201ENSMUST00000177510 514 ntBASIC5.99□□□□□ -1.45
Sox3P53784 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Gm27219-201ENSMUST00000184633 742 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.99□□□□□ -1.45
Sox3P53784 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Gm19739-201ENSMUST00000195941 153 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.99□□□□□ -1.45
Sox3P53784 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.99□□□□□ -1.45
Sox3P53784 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Sox3P53784 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Sox3P53784 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.99□□□□□ -1.45
Sox3P53784 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Sox3P53784 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sox3P53784 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.98□□□□□ -1.45
Sox3P53784 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Sox3P53784 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Sox3P53784 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Mir700-201ENSMUST00000102169 79 ntBASIC5.98□□□□□ -1.45
Sox3P53784 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Sox3P53784 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Sox3P53784 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Gm13641-201ENSMUST00000117993 473 ntBASIC5.98□□□□□ -1.45
Sox3P53784 Gm14038-201ENSMUST00000121500 807 ntBASIC5.98□□□□□ -1.45
Sox3P53784 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.98□□□□□ -1.45
Sox3P53784 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.98□□□□□ -1.45
Sox3P53784 Gm25717-201ENSMUST00000158631 353 ntBASIC5.98□□□□□ -1.45
Sox3P53784 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Sox3P53784 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC5.98□□□□□ -1.45
Sox3P53784 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.98□□□□□ -1.45
Sox3P53784 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox3P53784 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.98□□□□□ -1.45
Sox3P53784 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.98□□□□□ -1.45
Sox3P53784 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.98□□□□□ -1.45
Sox3P53784 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.98□□□□□ -1.45
Sox3P53784 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.98□□□□□ -1.45
Sox3P53784 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.98□□□□□ -1.45
Sox3P53784 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms