Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm44165-201ENSMUST00000203093 1469 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Gm37199-201ENSMUST00000193881 4065 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 AC165260.6-202ENSMUST00000224959 1958 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Gm23739-201ENSMUST00000102295 108 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm25919-201ENSMUST00000104271 132 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm24789-201ENSMUST00000104282 131 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 H3f3c-201ENSMUST00000119459 411 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Defa-ps14-201ENSMUST00000121373 418 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm12639-201ENSMUST00000121400 493 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm14383-201ENSMUST00000121637 386 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm12819-201ENSMUST00000122223 629 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC7.26□□□□□ -1.25
Sox1P53783 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.26□□□□□ -1.25
Sox1P53783 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.26□□□□□ -1.25
Sox1P53783 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm25824-201ENSMUST00000157092 121 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm24724-201ENSMUST00000158230 107 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm3221-201ENSMUST00000164869 440 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Gm18350-201ENSMUST00000187395 955 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Gm20871-201ENSMUST00000191322 931 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC7.26□□□□□ -1.25
Sox1P53783 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.26□□□□□ -1.25
Sox1P53783 Mir6906-201ENSMUST00000198998 58 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm43794-201ENSMUST00000200971 692 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Sox1P53783 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Gm38840-201ENSMUST00000204716 843 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm18410-201ENSMUST00000207199 577 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm44773-201ENSMUST00000207374 557 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Sox1P53783 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 AC153870.1-201ENSMUST00000219599 560 ntBASIC7.26□□□□□ -1.25
Sox1P53783 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.26□□□□□ -1.25
Sox1P53783 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.26□□□□□ -1.25
Sox1P53783 AC150560.3-201ENSMUST00000227442 455 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.26□□□□□ -1.25
Sox1P53783 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Gm37010-201ENSMUST00000194539 1704 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Sox1P53783 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sox1P53783 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.26□□□□□ -1.25
Sox1P53783 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Sox1P53783 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Sox1P53783 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Gm37140-201ENSMUST00000192914 1684 ntBASIC7.25□□□□□ -1.25
Sox1P53783 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sox1P53783 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms