Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Gm12293-201ENSMUST00000121898 590 ntBASIC6.26□□□□□ -1.41
HttP42859 Gm25389-201ENSMUST00000157340 286 ntBASIC6.26□□□□□ -1.41
HttP42859 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Mir6907-201ENSMUST00000183764 71 ntBASIC6.26□□□□□ -1.41
HttP42859 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.26□□□□□ -1.41
HttP42859 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.26□□□□□ -1.41
HttP42859 Gm4714-201ENSMUST00000203395 279 ntBASIC6.26□□□□□ -1.41
HttP42859 Gm4290-201ENSMUST00000206897 814 ntBASIC6.26□□□□□ -1.41
HttP42859 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.26□□□□□ -1.41
HttP42859 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.26□□□□□ -1.41
HttP42859 Gm5341-201ENSMUST00000058881 489 ntBASIC6.26□□□□□ -1.41
HttP42859 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.26□□□□□ -1.41
HttP42859 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HttP42859 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.26□□□□□ -1.41
HttP42859 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HttP42859 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.26□□□□□ -1.41
HttP42859 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.25□□□□□ -1.41
HttP42859 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm20056-201ENSMUST00000194813 519 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm7181-201ENSMUST00000202197 434 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.25□□□□□ -1.41
HttP42859 Gm8667-201ENSMUST00000211112 449 ntBASIC6.25□□□□□ -1.41
HttP42859 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.25□□□□□ -1.41
HttP42859 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.25□□□□□ -1.41
HttP42859 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.25□□□□□ -1.41
HttP42859 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.25□□□□□ -1.41
HttP42859 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.25□□□□□ -1.41
HttP42859 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.25□□□□□ -1.41
HttP42859 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HttP42859 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
HttP42859 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.25□□□□□ -1.41
HttP42859 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HttP42859 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HttP42859 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC6.25□□□□□ -1.41
HttP42859 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Gm15660-201ENSMUST00000118997 478 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm23631-201ENSMUST00000175291 123 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm28066-201ENSMUST00000188657 472 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.25□□□□□ -1.41
HttP42859 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.25□□□□□ -1.41
HttP42859 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.25□□□□□ -1.41
HttP42859 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HttP42859 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HttP42859 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.25□□□□□ -1.41
HttP42859 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HttP42859 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HttP42859 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
HttP42859 Gm23211-201ENSMUST00000122717 308 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm17907-201ENSMUST00000173150 710 ntBASIC6.25□□□□□ -1.41
HttP42859 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.25□□□□□ -1.41
HttP42859 Mir7074-201ENSMUST00000183884 63 ntBASIC6.25□□□□□ -1.41
HttP42859 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.25□□□□□ -1.41
HttP42859 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.25□□□□□ -1.41
HttP42859 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.25□□□□□ -1.41
HttP42859 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HttP42859 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC6.25□□□□□ -1.41
HttP42859 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.25□□□□□ -1.41
HttP42859 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HttP42859 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Grik1-210ENSMUST00000228034 2708 ntBASIC6.24□□□□□ -1.41
HttP42859 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HttP42859 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC6.24□□□□□ -1.41
HttP42859 Gm37215-201ENSMUST00000194927 1259 ntBASIC6.24□□□□□ -1.41
HttP42859 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC6.24□□□□□ -1.41
HttP42859 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HttP42859 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms