Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col18a1P39061 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Col18a1P39061 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col18a1P39061 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Col18a1P39061 Gm13870-201ENSMUST00000117214 1023 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Gm12978-201ENSMUST00000121250 522 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Gm15335-201ENSMUST00000122442 411 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Col18a1P39061 Gm18800-202ENSMUST00000188688 1105 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Gm38154-201ENSMUST00000195444 340 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Gm45078-201ENSMUST00000205343 546 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 AC124445.1-201ENSMUST00000218613 452 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Gm45073-201ENSMUST00000207688 4247 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Col18a1P39061 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col18a1P39061 Gm38451-201ENSMUST00000208329 2646 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Col18a1P39061 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Col18a1P39061 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 Gm42873-201ENSMUST00000196110 1726 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 Gm18852-201ENSMUST00000184149 3593 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 Gm22273-201ENSMUST00000104040 132 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Atf1-ps-201ENSMUST00000120608 810 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 Gm11498-201ENSMUST00000120660 949 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 Gm25025-201ENSMUST00000175018 111 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC8.28□□□□□ -1.08
Col18a1P39061 Gm17775-201ENSMUST00000198542 258 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 Gm44219-201ENSMUST00000203005 273 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 AC156952.1-201ENSMUST00000220361 793 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Col18a1P39061 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Col18a1P39061 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC8.28□□□□□ -1.08
Col18a1P39061 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col18a1P39061 AC165080.3-201ENSMUST00000217162 3116 ntBASIC8.28□□□□□ -1.08
Col18a1P39061 Ear-ps2-201ENSMUST00000100689 466 ntBASIC8.27□□□□□ -1.08
Col18a1P39061 Gm12874-201ENSMUST00000117190 913 ntBASIC8.27□□□□□ -1.08
Col18a1P39061 Gm8032-201ENSMUST00000171009 574 ntBASIC8.27□□□□□ -1.08
Col18a1P39061 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC8.27□□□□□ -1.08
Col18a1P39061 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC8.27□□□□□ -1.08
Col18a1P39061 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC8.27□□□□□ -1.08
Col18a1P39061 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC8.27□□□□□ -1.08
Col18a1P39061 Gm5341-201ENSMUST00000058881 489 ntBASIC8.27□□□□□ -1.08
Col18a1P39061 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Col18a1P39061 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Col18a1P39061 Gm10258-201ENSMUST00000091270 2123 ntBASIC8.27□□□□□ -1.08
Col18a1P39061 Gm17165-201ENSMUST00000096155 493 ntBASIC8.27□□□□□ -1.08
Col18a1P39061 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.27□□□□□ -1.08
Col18a1P39061 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Col18a1P39061 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.27□□□□□ -1.08
Col18a1P39061 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.08
Col18a1P39061 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC8.27□□□□□ -1.08
Col18a1P39061 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Col18a1P39061 Gm42968-201ENSMUST00000198578 1372 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Col18a1P39061 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.27□□□□□ -1.09
Col18a1P39061 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Col18a1P39061 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm42894-201ENSMUST00000200788 3390 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms