Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm11799-201ENSMUST00000116110 460 ntBASIC5.48□□□□□ -1.53
P20040 Gm14382-201ENSMUST00000117374 437 ntBASIC5.48□□□□□ -1.53
P20040 Gm11462-201ENSMUST00000117749 562 ntBASIC5.48□□□□□ -1.53
P20040 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.48□□□□□ -1.53
P20040 Gm14515-201ENSMUST00000121327 216 ntBASIC5.48□□□□□ -1.53
P20040 Gm23884-201ENSMUST00000122687 294 ntBASIC5.48□□□□□ -1.53
P20040 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
P20040 Gm26353-201ENSMUST00000158224 255 ntBASIC5.48□□□□□ -1.53
P20040 Gm22428-201ENSMUST00000158554 132 ntBASIC5.48□□□□□ -1.53
P20040 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
P20040 Gm44370-201ENSMUST00000175436 112 ntBASIC5.48□□□□□ -1.53
P20040 Gm9529-201ENSMUST00000177598 579 ntBASIC5.48□□□□□ -1.53
P20040 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.48□□□□□ -1.53
P20040 Mir6367-201ENSMUST00000183385 102 ntBASIC5.48□□□□□ -1.53
P20040 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.48□□□□□ -1.53
P20040 Gm38237-201ENSMUST00000193366 376 ntBASIC5.48□□□□□ -1.53
P20040 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.48□□□□□ -1.53
P20040 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.48□□□□□ -1.53
P20040 Gm43850-201ENSMUST00000202021 578 ntBASIC5.48□□□□□ -1.53
P20040 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.48□□□□□ -1.53
P20040 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.48□□□□□ -1.53
P20040 Gm18600-201ENSMUST00000207205 505 ntBASIC5.48□□□□□ -1.53
P20040 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.48□□□□□ -1.53
P20040 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Gm18940-201ENSMUST00000222518 871 ntBASIC5.48□□□□□ -1.53
P20040 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.48□□□□□ -1.53
P20040 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
P20040 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
P20040 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
P20040 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
P20040 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
P20040 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
P20040 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.47□□□□□ -1.53
P20040 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
P20040 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.47□□□□□ -1.53
P20040 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.47□□□□□ -1.53
P20040 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.47□□□□□ -1.53
P20040 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.47□□□□□ -1.53
P20040 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
P20040 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Gm8250-201ENSMUST00000117398 774 ntBASIC5.47□□□□□ -1.53
P20040 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.47□□□□□ -1.53
P20040 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.47□□□□□ -1.53
P20040 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.47□□□□□ -1.53
P20040 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.47□□□□□ -1.53
P20040 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.47□□□□□ -1.53
P20040 Gm25487-201ENSMUST00000158725 125 ntBASIC5.47□□□□□ -1.53
P20040 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.47□□□□□ -1.53
P20040 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Gm3242-201ENSMUST00000171273 485 ntBASIC5.47□□□□□ -1.53
P20040 Gm23632-201ENSMUST00000175289 125 ntBASIC5.47□□□□□ -1.53
P20040 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.47□□□□□ -1.53
P20040 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.47□□□□□ -1.53
P20040 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.47□□□□□ -1.53
P20040 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.47□□□□□ -1.53
P20040 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.47□□□□□ -1.53
P20040 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.47□□□□□ -1.53
P20040 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.47□□□□□ -1.53
P20040 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.47□□□□□ -1.53
P20040 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.47□□□□□ -1.53
P20040 Mir6362-201ENSMUST00000184329 107 ntBASIC5.47□□□□□ -1.53
P20040 Gm5260-201ENSMUST00000186157 949 ntBASIC5.47□□□□□ -1.53
P20040 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.47□□□□□ -1.53
P20040 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.47□□□□□ -1.53
P20040 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.47□□□□□ -1.53
P20040 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.47□□□□□ -1.53
P20040 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.47□□□□□ -1.53
P20040 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Gm24695-201ENSMUST00000083877 83 ntBASIC5.47□□□□□ -1.53
P20040 Gm24032-201ENSMUST00000083932 159 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms