Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm44419-201ENSMUST00000203338 229 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm44157-201ENSMUST00000204720 410 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm45742-201ENSMUST00000212400 433 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm31711-201ENSMUST00000220687 196 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 AC154558.1-201ENSMUST00000222278 415 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 AC162183.1-201ENSMUST00000224843 472 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 AC167013.4-201ENSMUST00000226712 317 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 AC133203.1-201ENSMUST00000228241 301 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm23506-201ENSMUST00000083077 107 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Mir455-201ENSMUST00000093594 82 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm37161-201ENSMUST00000191994 2697 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Nos2-203ENSMUST00000214397 3429 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm8366-201ENSMUST00000118751 1769 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm37999-201ENSMUST00000195178 1809 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm37354-201ENSMUST00000193333 2384 ntBASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx1-1G3UXB3 Gm10644-201ENSMUST00000098595 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Prokr2-203ENSMUST00000110157 4005 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Dync1i2-206ENSMUST00000112140 2573 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm11969-201ENSMUST00000118848 356 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm14013-201ENSMUST00000119006 270 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm13038-201ENSMUST00000119886 459 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm20918-201ENSMUST00000179629 684 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm28847-201ENSMUST00000186778 700 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm28974-201ENSMUST00000187893 231 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm8596-201ENSMUST00000188004 792 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm28508-201ENSMUST00000188016 696 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm37942-201ENSMUST00000191875 628 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm44403-201ENSMUST00000198554 129 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm45189-201ENSMUST00000208567 363 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 AC138284.4-201ENSMUST00000216704 2882 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 AC162467.3-201ENSMUST00000219716 2172 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Zfp637-211ENSMUST00000223041 1128 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm26206-201ENSMUST00000082908 110 ntBASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Gm12116-201ENSMUST00000131851 2770 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC9.69□□□□□ -0.86
Nkx1-1G3UXB3 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx1-1G3UXB3 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx1-1G3UXB3 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx1-1G3UXB3 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx1-1G3UXB3 Gm9903-201ENSMUST00000181102 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx1-1G3UXB3 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx1-1G3UXB3 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms