Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm22741-201ENSMUST00000083438 165 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Sec24c-202ENSMUST00000223751 4196 ntBASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Gm11633-201ENSMUST00000118176 444 ntBASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Gm4412-201ENSMUST00000186660 433 ntBASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Gm45610-201ENSMUST00000209227 784 ntBASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
Col6a3E9PWQ3 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Gm12189-201ENSMUST00000119779 912 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Gm12237-201ENSMUST00000120158 470 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Gm25826-201ENSMUST00000157090 137 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Gm24081-201ENSMUST00000175177 125 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Mir6391-201ENSMUST00000184391 104 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Gm43970-201ENSMUST00000204346 3605 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Gm42679-201ENSMUST00000197086 2906 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col6a3E9PWQ3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm23193-201ENSMUST00000102427 82 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm12937-201ENSMUST00000118333 448 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm11196-201ENSMUST00000119052 395 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm44757-201ENSMUST00000206373 157 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm8667-201ENSMUST00000211112 449 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm2099-201ENSMUST00000220979 412 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm8506-201ENSMUST00000186661 829 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a3E9PWQ3 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms