Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm18969-201ENSMUST00000189423 730 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm29551-201ENSMUST00000190913 698 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm43148-201ENSMUST00000198237 520 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 AC153937.1-201ENSMUST00000218734 412 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm5087-204ENSMUST00000225820 645 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 AV026068-231ENSMUST00000225862 482 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm14267-201ENSMUST00000119751 496 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm11197-201ENSMUST00000145158 839 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm22895-201ENSMUST00000157508 308 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm43744-201ENSMUST00000196387 688 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm44494-201ENSMUST00000196760 129 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm43631-201ENSMUST00000202011 369 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col4a6B1AVK5 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm7927-201ENSMUST00000118818 880 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm14842-201ENSMUST00000119577 269 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm15335-201ENSMUST00000122442 411 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm24767-201ENSMUST00000158509 95 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm8185-201ENSMUST00000160999 669 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.32□□□□□ -1.4
Col4a6B1AVK5 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col4a6B1AVK5 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms