Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm14173-201ENSMUST00000117690 278 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm13811-201ENSMUST00000117800 256 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm26023-201ENSMUST00000122722 313 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm18705-201ENSMUST00000215985 913 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm37274-201ENSMUST00000192167 1682 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm14356-201ENSMUST00000118322 869 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm12317-201ENSMUST00000122307 319 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Mir6417-201ENSMUST00000183815 116 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm9332-201ENSMUST00000198431 730 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm38120-201ENSMUST00000195506 4642 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm28379-202ENSMUST00000187676 2896 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm13333-201ENSMUST00000119424 781 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm26738-201ENSMUST00000181312 601 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm29357-201ENSMUST00000186877 698 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm43160-201ENSMUST00000196453 421 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm7890-201ENSMUST00000204877 601 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 AC140280.1-201ENSMUST00000227826 1847 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a4A2AX52 AC129208.1-201ENSMUST00000227474 2906 ntBASIC5.18□□□□□ -1.58
Col6a4A2AX52 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a4A2AX52 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms