Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim3Q9R1R2 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm22710-201ENSMUST00000116892 125 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm13455-201ENSMUST00000118767 517 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm22235-201ENSMUST00000157085 110 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm29663-201ENSMUST00000186962 853 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm5853-201ENSMUST00000197183 632 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm24695-201ENSMUST00000083877 83 ntBASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim3Q9R1R2 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm12583-201ENSMUST00000120677 853 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm23259-201ENSMUST00000158318 303 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm22428-201ENSMUST00000158554 132 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm23207-201ENSMUST00000158665 102 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm23632-201ENSMUST00000175289 125 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm37191-201ENSMUST00000193346 388 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm45733-201ENSMUST00000212988 437 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm19340-201ENSMUST00000221995 345 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms