Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm25795-201ENSMUST00000104421 132 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm12307-201ENSMUST00000120581 590 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm13998-201ENSMUST00000120952 335 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm14349-201ENSMUST00000137155 902 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm26738-201ENSMUST00000181312 601 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm6009-201ENSMUST00000210848 280 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm10688-201ENSMUST00000214985 520 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm9088-201ENSMUST00000220237 508 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm18405-201ENSMUST00000220743 511 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 AC132954.2-201ENSMUST00000222400 403 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gm24041-201ENSMUST00000083115 156 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Upk3aQ9JKX8 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm12308-201ENSMUST00000120440 389 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm13578-201ENSMUST00000120849 590 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm12890-201ENSMUST00000120885 373 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm14515-201ENSMUST00000121327 216 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm20620-201ENSMUST00000177528 168 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm7570-201ENSMUST00000215246 698 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 AC132446.1-201ENSMUST00000222655 226 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm10095-201ENSMUST00000222765 483 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm5229-201ENSMUST00000039375 354 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.91□□□□□ -1.46
Upk3aQ9JKX8 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms