Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Gm44538-201ENSMUST00000205615 348 ntBASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Gm5055-201ENSMUST00000215697 581 ntBASIC6.29□□□□□ -1.4
Trub1Q8C0D0 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Gm33312-201ENSMUST00000222443 332 ntBASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.29□□□□□ -1.4
Trub1Q8C0D0 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trub1Q8C0D0 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm16074-201ENSMUST00000119524 444 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm13669-201ENSMUST00000122366 457 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm7832-201ENSMUST00000202613 880 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm18839-201ENSMUST00000204292 670 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm24041-201ENSMUST00000083115 156 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trub1Q8C0D0 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.27□□□□□ -1.4
Trub1Q8C0D0 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Trub1Q8C0D0 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm24272-201ENSMUST00000102329 98 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm13493-201ENSMUST00000120318 493 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm25219-201ENSMUST00000157545 330 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm17121-201ENSMUST00000170414 847 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm22569-201ENSMUST00000175545 124 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm17222-201ENSMUST00000180135 847 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm5229-201ENSMUST00000039375 354 ntBASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trub1Q8C0D0 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms