Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PrkdcP97313 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm23211-201ENSMUST00000122717 308 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm26023-201ENSMUST00000122722 313 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.08□□□□□ -1.76
PrkdcP97313 Gm21399-201ENSMUST00000180210 597 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.08□□□□□ -1.76
PrkdcP97313 Gm35648-201ENSMUST00000202304 475 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm45215-201ENSMUST00000206407 395 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 AC132384.3-201ENSMUST00000219709 472 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PrkdcP97313 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PrkdcP97313 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm45221-201ENSMUST00000207822 2272 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Gm37082-201ENSMUST00000192629 1927 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm13818-201ENSMUST00000119441 511 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm23553-201ENSMUST00000157817 295 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Gm10319-202ENSMUST00000159439 846 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm2059-201ENSMUST00000212025 287 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.07□□□□□ -1.76
PrkdcP97313 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 CT030645.3-201ENSMUST00000225483 1022 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm42866-201ENSMUST00000195919 3304 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Thap6-201ENSMUST00000191860 3151 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PrkdcP97313 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Grik1-209ENSMUST00000227986 2942 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Mir199b-201ENSMUST00000175066 110 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Clec2j-202ENSMUST00000203658 606 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Gm18791-201ENSMUST00000204611 726 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm44185-201ENSMUST00000204539 3307 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PrkdcP97313 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm11774-201ENSMUST00000118601 293 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC4.07□□□□□ -1.76
PrkdcP97313 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.07□□□□□ -1.76
PrkdcP97313 AC132317.2-201ENSMUST00000227301 519 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms