Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm23077-201ENSMUST00000157854 116 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.75□□□□□ -1.33
Tpm1P58771 Gm24157-201ENSMUST00000175265 111 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Tpm1P58771 Gm18352-201ENSMUST00000189113 902 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm29592-201ENSMUST00000189434 370 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm29214-201ENSMUST00000190216 570 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm29605-201ENSMUST00000190800 292 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.75□□□□□ -1.33
Tpm1P58771 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm44075-201ENSMUST00000204208 216 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm44896-201ENSMUST00000206190 772 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.75□□□□□ -1.33
Tpm1P58771 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.75□□□□□ -1.33
Tpm1P58771 Gm4556-201ENSMUST00000217808 355 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.75□□□□□ -1.33
Tpm1P58771 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Tpm1P58771 Gm19340-201ENSMUST00000221995 345 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.75□□□□□ -1.33
Tpm1P58771 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Tpm1P58771 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Tpm1P58771 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Tpm1P58771 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Tpm1P58771 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Tpm1P58771 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.75□□□□□ -1.33
Tpm1P58771 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.75□□□□□ -1.33
Tpm1P58771 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Tpm1P58771 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Tpm1P58771 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Tpm1P58771 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Tpm1P58771 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.74□□□□□ -1.33
Tpm1P58771 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Tpm1P58771 Gm24790-201ENSMUST00000104285 132 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm12565-201ENSMUST00000119004 649 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm12778-201ENSMUST00000122341 333 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.74□□□□□ -1.33
Tpm1P58771 Gm23674-201ENSMUST00000157473 131 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm23756-201ENSMUST00000157582 114 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm23894-201ENSMUST00000158107 313 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm23343-201ENSMUST00000158964 143 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 Gm26959-201ENSMUST00000182376 978 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.74□□□□□ -1.33
Tpm1P58771 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 Gm29111-201ENSMUST00000188823 696 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm28584-201ENSMUST00000191489 696 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm38138-201ENSMUST00000193274 696 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm37991-201ENSMUST00000194297 696 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 Gm36378-201ENSMUST00000201709 388 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm44108-201ENSMUST00000203525 422 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Tpm1P58771 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.74□□□□□ -1.33
Tpm1P58771 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Tpm1P58771 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Tpm1P58771 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Tpm1P58771 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Tpm1P58771 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Tpm1P58771 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.73□□□□□ -1.33
Tpm1P58771 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Tpm1P58771 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Tpm1P58771 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Tpm1P58771 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Tpm1P58771 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.73□□□□□ -1.33
Tpm1P58771 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Tpm1P58771 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.73□□□□□ -1.33
Tpm1P58771 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms