Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox3P53784 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Sox3P53784 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox3P53784 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Sox3P53784 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Sox3P53784 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sox3P53784 Gm15715-201ENSMUST00000118032 283 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Sox3P53784 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
Sox3P53784 Gm26023-201ENSMUST00000122722 313 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 Gm25962-201ENSMUST00000157173 168 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Gm25459-201ENSMUST00000157953 114 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Mir3572-201ENSMUST00000175549 86 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Gm20615-201ENSMUST00000177503 705 ntBASIC6.01□□□□□ -1.45
Sox3P53784 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Gm42437-201ENSMUST00000197263 923 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Gm4742-201ENSMUST00000200261 771 ntBASIC6.01□□□□□ -1.45
Sox3P53784 BC049739-201ENSMUST00000202626 660 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Gm18805-201ENSMUST00000206872 655 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.01□□□□□ -1.45
Sox3P53784 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.01□□□□□ -1.45
Sox3P53784 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sox3P53784 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Sox3P53784 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Sox3P53784 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox3P53784 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sox3P53784 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Sox3P53784 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 Gm38377-201ENSMUST00000193253 3772 ntBASIC6□□□□□ -1.45
Sox3P53784 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sox3P53784 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6□□□□□ -1.45
Sox3P53784 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6□□□□□ -1.45
Sox3P53784 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6□□□□□ -1.45
Sox3P53784 Gm24369-201ENSMUST00000175387 96 ntBASIC6□□□□□ -1.45
Sox3P53784 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sox3P53784 Gm26607-201ENSMUST00000180661 867 ntBASIC6□□□□□ -1.45
Sox3P53784 Gm38181-201ENSMUST00000181357 720 ntBASIC6□□□□□ -1.45
Sox3P53784 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 Gm28080-201ENSMUST00000188552 722 ntBASIC6□□□□□ -1.45
Sox3P53784 Gm28883-201ENSMUST00000189256 369 ntBASIC6□□□□□ -1.45
Sox3P53784 Gm18849-201ENSMUST00000189861 560 ntBASIC6□□□□□ -1.45
Sox3P53784 Gm37609-201ENSMUST00000191778 678 ntBASIC6□□□□□ -1.45
Sox3P53784 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6□□□□□ -1.45
Sox3P53784 AC138284.5-201ENSMUST00000214389 652 ntBASIC6□□□□□ -1.45
Sox3P53784 Olfr809-203ENSMUST00000218237 1100 ntBASIC6□□□□□ -1.45
Sox3P53784 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sox3P53784 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Sox3P53784 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 AC117769.2-201ENSMUST00000224612 469 ntBASIC6□□□□□ -1.45
Sox3P53784 AC170810.1-201ENSMUST00000228267 672 ntBASIC6□□□□□ -1.45
Sox3P53784 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 Gm5341-201ENSMUST00000058881 489 ntBASIC6□□□□□ -1.45
Sox3P53784 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sox3P53784 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Sox3P53784 Gm28392-201ENSMUST00000077630 393 ntBASIC6□□□□□ -1.45
Sox3P53784 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sox3P53784 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox3P53784 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms