Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm7492-201ENSMUST00000201745 725 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC7.28□□□□□ -1.24
Sox1P53783 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.28□□□□□ -1.24
Sox1P53783 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 AC153541.1-201ENSMUST00000213786 294 ntBASIC7.28□□□□□ -1.24
Sox1P53783 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC7.28□□□□□ -1.24
Sox1P53783 AC166323.1-201ENSMUST00000217756 367 ntBASIC7.28□□□□□ -1.24
Sox1P53783 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC7.28□□□□□ -1.24
Sox1P53783 AC159205.4-201ENSMUST00000225964 704 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.28□□□□□ -1.24
Sox1P53783 AC154838.1-201ENSMUST00000228944 911 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sox1P53783 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
Sox1P53783 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sox1P53783 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sox1P53783 Gm23970-201ENSMUST00000083319 107 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sox1P53783 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sox1P53783 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gm42656-201ENSMUST00000201506 2305 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Sox1P53783 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Sox1P53783 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Sox1P53783 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.24
Sox1P53783 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.27□□□□□ -1.24
Sox1P53783 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm24434-201ENSMUST00000104081 132 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm25422-201ENSMUST00000104219 129 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm24374-201ENSMUST00000104394 106 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm11746-201ENSMUST00000119843 821 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm13440-201ENSMUST00000121665 496 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm12618-201ENSMUST00000121754 483 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm14212-201ENSMUST00000122023 826 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.27□□□□□ -1.25
Sox1P53783 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm22794-201ENSMUST00000157228 306 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Gm18560-201ENSMUST00000173463 1123 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm27355-201ENSMUST00000185045 128 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm7634-201ENSMUST00000185778 553 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm5711-201ENSMUST00000197896 421 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm43768-201ENSMUST00000198380 1258 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm44239-201ENSMUST00000204228 271 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC7.27□□□□□ -1.25
Sox1P53783 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm4510-201ENSMUST00000218265 427 ntBASIC7.27□□□□□ -1.25
Sox1P53783 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm18388-201ENSMUST00000222339 557 ntBASIC7.27□□□□□ -1.25
Sox1P53783 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.27□□□□□ -1.25
Sox1P53783 AC164116.1-201ENSMUST00000225810 622 ntBASIC7.27□□□□□ -1.25
Sox1P53783 AC170810.1-201ENSMUST00000228267 672 ntBASIC7.27□□□□□ -1.25
Sox1P53783 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Sox1P53783 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Sox1P53783 Gm24707-201ENSMUST00000082812 107 ntBASIC7.27□□□□□ -1.25
Sox1P53783 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Sox1P53783 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms