Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm16250-201ENSMUST00000148974 256 ntBASIC6.28□□□□□ -1.4
HttP42859 Gm23171-201ENSMUST00000157159 264 ntBASIC6.28□□□□□ -1.4
HttP42859 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC6.28□□□□□ -1.4
HttP42859 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.28□□□□□ -1.4
HttP42859 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.28□□□□□ -1.4
HttP42859 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
HttP42859 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HttP42859 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HttP42859 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.28□□□□□ -1.4
HttP42859 Gm7688-201ENSMUST00000212857 337 ntBASIC6.28□□□□□ -1.4
HttP42859 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.28□□□□□ -1.4
HttP42859 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.28□□□□□ -1.4
HttP42859 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.28□□□□□ -1.4
HttP42859 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.28□□□□□ -1.4
HttP42859 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HttP42859 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HttP42859 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HttP42859 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HttP42859 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.28□□□□□ -1.4
HttP42859 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HttP42859 Gm6062-201ENSMUST00000120462 631 ntBASIC6.28□□□□□ -1.4
HttP42859 Gm7309-201ENSMUST00000121670 581 ntBASIC6.28□□□□□ -1.4
HttP42859 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.28□□□□□ -1.4
HttP42859 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.28□□□□□ -1.4
HttP42859 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.28□□□□□ -1.4
HttP42859 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.28□□□□□ -1.4
HttP42859 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HttP42859 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HttP42859 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HttP42859 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.27□□□□□ -1.4
HttP42859 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
HttP42859 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
HttP42859 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.27□□□□□ -1.41
HttP42859 Gm4852-201ENSMUST00000121202 729 ntBASIC6.27□□□□□ -1.41
HttP42859 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.27□□□□□ -1.41
HttP42859 Gm29781-201ENSMUST00000203862 478 ntBASIC6.27□□□□□ -1.41
HttP42859 Gm3189-201ENSMUST00000205595 832 ntBASIC6.27□□□□□ -1.41
HttP42859 Gm45215-201ENSMUST00000206407 395 ntBASIC6.27□□□□□ -1.41
HttP42859 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC6.27□□□□□ -1.41
HttP42859 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.27□□□□□ -1.41
HttP42859 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HttP42859 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HttP42859 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.27□□□□□ -1.41
HttP42859 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HttP42859 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HttP42859 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.27□□□□□ -1.41
HttP42859 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.27□□□□□ -1.41
HttP42859 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HttP42859 Gm11774-201ENSMUST00000118601 293 ntBASIC6.27□□□□□ -1.41
HttP42859 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.27□□□□□ -1.41
HttP42859 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
HttP42859 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HttP42859 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
HttP42859 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Gm10744-201ENSMUST00000220184 2706 ntBASIC6.26□□□□□ -1.41
HttP42859 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HttP42859 Gm27760-201ENSMUST00000185048 114 ntBASIC6.26□□□□□ -1.41
HttP42859 Gm6717-201ENSMUST00000185549 838 ntBASIC6.26□□□□□ -1.41
HttP42859 Gm20586-201ENSMUST00000210122 547 ntBASIC6.26□□□□□ -1.41
HttP42859 Gm7042-201ENSMUST00000223027 384 ntBASIC6.26□□□□□ -1.41
HttP42859 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
HttP42859 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HttP42859 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HttP42859 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HttP42859 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HttP42859 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.26□□□□□ -1.41
HttP42859 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms