Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Col18a1P39061 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.31□□□□□ -1.08
Col18a1P39061 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Gm16089-201ENSMUST00000117679 336 ntBASIC8.31□□□□□ -1.08
Col18a1P39061 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Gm17086-201ENSMUST00000171346 484 ntBASIC8.31□□□□□ -1.08
Col18a1P39061 Gm26731-201ENSMUST00000180683 543 ntBASIC8.31□□□□□ -1.08
Col18a1P39061 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC8.31□□□□□ -1.08
Col18a1P39061 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC8.31□□□□□ -1.08
Col18a1P39061 Gm7688-201ENSMUST00000212857 337 ntBASIC8.31□□□□□ -1.08
Col18a1P39061 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 AC192088.3-201ENSMUST00000227858 831 ntBASIC8.31□□□□□ -1.08
Col18a1P39061 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Col18a1P39061 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Col18a1P39061 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC8.31□□□□□ -1.08
Col18a1P39061 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC8.31□□□□□ -1.08
Col18a1P39061 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Col18a1P39061 AC156025.2-201ENSMUST00000225907 1533 ntBASIC8.31□□□□□ -1.08
Col18a1P39061 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Gm37717-201ENSMUST00000192647 3027 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Col18a1P39061 Gm28507-201ENSMUST00000189737 703 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Gm28188-201ENSMUST00000190483 236 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.3□□□□□ -1.08
Col18a1P39061 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC8.3□□□□□ -1.08
Col18a1P39061 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Col18a1P39061 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC8.3□□□□□ -1.08
Col18a1P39061 AC192616.3-201ENSMUST00000220797 1124 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 AC159208.1-201ENSMUST00000221403 649 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 AC156016.5-201ENSMUST00000228742 355 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC8.3□□□□□ -1.08
Col18a1P39061 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col18a1P39061 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Gm16478-201ENSMUST00000208113 5084 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
Col18a1P39061 Gm13738-201ENSMUST00000122437 469 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Col18a1P39061 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Gm15970-201ENSMUST00000160623 834 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Mir7056-201ENSMUST00000183776 59 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Gm36999-201ENSMUST00000192756 1046 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Gm18330-201ENSMUST00000199246 547 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 AC122305.2-201ENSMUST00000215148 834 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Gm19169-201ENSMUST00000220109 1246 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 AC123062.1-201ENSMUST00000221287 481 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 AC123665.4-201ENSMUST00000228790 249 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col18a1P39061 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col18a1P39061 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col18a1P39061 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col18a1P39061 Gm42478-201ENSMUST00000199252 1467 ntBASIC8.3□□□□□ -1.08
Col18a1P39061 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC8.29□□□□□ -1.08
Col18a1P39061 AC120153.1-201ENSMUST00000226502 1311 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Gm37959-201ENSMUST00000191700 2897 ntBASIC8.29□□□□□ -1.08
Col18a1P39061 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC8.29□□□□□ -1.08
Col18a1P39061 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col18a1P39061 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms