Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp4P35123 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.95□□□□□ -1.3
Usp4P35123 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Usp4P35123 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Usp4P35123 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Usp4P35123 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp4P35123 AC164297.4-201ENSMUST00000224225 1307 ntBASIC6.95□□□□□ -1.3
Usp4P35123 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp4P35123 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp4P35123 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp4P35123 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Usp4P35123 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Gm25379-201ENSMUST00000104338 114 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm12939-201ENSMUST00000117303 165 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm12653-201ENSMUST00000117778 561 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm12713-201ENSMUST00000118404 764 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm11903-201ENSMUST00000118958 727 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.94□□□□□ -1.3
Usp4P35123 Gm3585-201ENSMUST00000173438 875 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 Gm8506-201ENSMUST00000186661 829 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm28801-201ENSMUST00000188761 449 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm28803-201ENSMUST00000190385 764 ntBASIC6.94□□□□□ -1.3
Usp4P35123 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Usp4P35123 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Usp4P35123 Gm42796-201ENSMUST00000199913 1087 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Gm7554-201ENSMUST00000202282 574 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm44225-201ENSMUST00000203582 186 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm45122-201ENSMUST00000206376 784 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.94□□□□□ -1.3
Usp4P35123 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.94□□□□□ -1.3
Usp4P35123 AC167192.4-201ENSMUST00000224087 993 ntBASIC6.94□□□□□ -1.3
Usp4P35123 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.94□□□□□ -1.3
Usp4P35123 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Usp4P35123 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Usp4P35123 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Usp4P35123 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Usp4P35123 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Usp4P35123 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Usp4P35123 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Usp4P35123 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Usp4P35123 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Usp4P35123 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.94□□□□□ -1.3
Usp4P35123 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Usp4P35123 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.93□□□□□ -1.3
Usp4P35123 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.93□□□□□ -1.3
Usp4P35123 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Usp4P35123 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Usp4P35123 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.93□□□□□ -1.3
Usp4P35123 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Usp4P35123 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Usp4P35123 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Usp4P35123 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.93□□□□□ -1.3
Usp4P35123 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Usp4P35123 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.93□□□□□ -1.3
Usp4P35123 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Usp4P35123 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Usp4P35123 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Usp4P35123 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.93□□□□□ -1.3
Usp4P35123 Gm25877-201ENSMUST00000104326 129 ntBASIC6.93□□□□□ -1.3
Usp4P35123 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.93□□□□□ -1.3
Usp4P35123 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC6.93□□□□□ -1.3
Usp4P35123 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC6.93□□□□□ -1.3
Usp4P35123 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC6.93□□□□□ -1.3
Usp4P35123 Gm14869-201ENSMUST00000119007 884 ntBASIC6.93□□□□□ -1.3
Usp4P35123 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.93□□□□□ -1.3
Usp4P35123 Gm12140-201ENSMUST00000121214 544 ntBASIC6.93□□□□□ -1.3
Usp4P35123 Gm13237-201ENSMUST00000122151 635 ntBASIC6.93□□□□□ -1.3
Usp4P35123 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Usp4P35123 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.93□□□□□ -1.3
Usp4P35123 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.93□□□□□ -1.3
Usp4P35123 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC6.93□□□□□ -1.3
Usp4P35123 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.93□□□□□ -1.3
Usp4P35123 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Usp4P35123 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms