Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm15331-201ENSMUST00000120225 385 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.98□□□□□ -1.29
Col2a1P28481 Gm22492-201ENSMUST00000157192 297 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm16531-201ENSMUST00000180658 967 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm28847-201ENSMUST00000186778 700 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm8419-201ENSMUST00000189886 412 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm37358-201ENSMUST00000195492 479 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm44494-201ENSMUST00000196760 129 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.98□□□□□ -1.29
Col2a1P28481 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.98□□□□□ -1.29
Col2a1P28481 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.98□□□□□ -1.29
Col2a1P28481 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col2a1P28481 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Col2a1P28481 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Col2a1P28481 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Col2a1P28481 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.97□□□□□ -1.29
Col2a1P28481 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Col2a1P28481 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Col2a1P28481 Gm18259-201ENSMUST00000220991 2010 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.97□□□□□ -1.29
Col2a1P28481 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.97□□□□□ -1.29
Col2a1P28481 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Col2a1P28481 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Col2a1P28481 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.97□□□□□ -1.29
Col2a1P28481 Gm8501-201ENSMUST00000117684 432 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Gm16179-201ENSMUST00000120685 373 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.97□□□□□ -1.29
Col2a1P28481 Gm23280-201ENSMUST00000157905 139 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Gm22132-201ENSMUST00000175316 100 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Gm28353-201ENSMUST00000186482 570 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Gm28533-201ENSMUST00000186741 570 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Mir6906-201ENSMUST00000198998 58 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Gm8930-201ENSMUST00000201693 768 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Col2a1P28481 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.97□□□□□ -1.29
Col2a1P28481 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.97□□□□□ -1.29
Col2a1P28481 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.97□□□□□ -1.29
Col2a1P28481 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Col2a1P28481 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col2a1P28481 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col2a1P28481 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Col2a1P28481 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col2a1P28481 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.96□□□□□ -1.29
Col2a1P28481 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 Gm14382-201ENSMUST00000117374 437 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 Gm16423-201ENSMUST00000120078 947 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col2a1P28481 Gm42961-201ENSMUST00000202023 181 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.96□□□□□ -1.3
Col2a1P28481 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.96□□□□□ -1.3
Col2a1P28481 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.96□□□□□ -1.3
Col2a1P28481 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col2a1P28481 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col2a1P28481 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col2a1P28481 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 Gm37040-201ENSMUST00000191740 1824 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col2a1P28481 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.96□□□□□ -1.3
Col2a1P28481 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col2a1P28481 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col2a1P28481 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.95□□□□□ -1.3
Col2a1P28481 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col2a1P28481 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms