Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm28636-201ENSMUST00000186353 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28452-201ENSMUST00000186623 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29298-201ENSMUST00000186704 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28185-201ENSMUST00000186815 694 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28227-201ENSMUST00000186862 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28796-201ENSMUST00000186905 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29659-201ENSMUST00000187063 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28473-201ENSMUST00000187325 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28558-201ENSMUST00000187373 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28682-201ENSMUST00000187430 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28738-201ENSMUST00000187480 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28949-201ENSMUST00000187805 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28773-201ENSMUST00000187925 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29319-201ENSMUST00000188060 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29422-201ENSMUST00000188062 694 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm21654-201ENSMUST00000188086 691 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28734-201ENSMUST00000188104 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28787-201ENSMUST00000188357 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm8581-201ENSMUST00000188636 890 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29312-201ENSMUST00000188724 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29451-201ENSMUST00000188862 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29637-201ENSMUST00000188877 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29033-201ENSMUST00000189114 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29614-201ENSMUST00000189263 694 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28751-201ENSMUST00000189287 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29559-201ENSMUST00000189412 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28272-201ENSMUST00000189512 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28483-201ENSMUST00000189519 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28123-201ENSMUST00000189725 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28368-201ENSMUST00000189804 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29119-201ENSMUST00000189973 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28716-201ENSMUST00000190217 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29239-201ENSMUST00000190304 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28837-201ENSMUST00000190397 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28968-201ENSMUST00000190413 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28531-201ENSMUST00000190529 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28165-201ENSMUST00000190669 694 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29181-201ENSMUST00000191288 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm38229-201ENSMUST00000191931 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm32347-201ENSMUST00000192944 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm38185-201ENSMUST00000193195 694 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm38121-201ENSMUST00000193213 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm38035-201ENSMUST00000194427 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm38350-201ENSMUST00000194789 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm37990-201ENSMUST00000195821 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm43243-201ENSMUST00000199964 278 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm18329-201ENSMUST00000215832 589 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm9321-201ENSMUST00000221179 778 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 AC164618.1-201ENSMUST00000225769 592 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 AC123656.1-201ENSMUST00000227121 581 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 AC139209.2-201ENSMUST00000227680 1208 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 AC123917.1-201ENSMUST00000228063 1048 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 AC122937.2-201ENSMUST00000228258 1051 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Sdc1P18828 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sdc1P18828 Mir24-2-201ENSMUST00000083607 107 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC4.94□□□□□ -1.62
Sdc1P18828 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Sdc1P18828 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 AW046200-203ENSMUST00000211787 2479 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 AC121844.3-201ENSMUST00000219124 1785 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.93□□□□□ -1.62
Sdc1P18828 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Sdc1P18828 Gm22439-201ENSMUST00000104048 132 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gm24888-201ENSMUST00000104387 130 ntBASIC4.93□□□□□ -1.62
Sdc1P18828 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 121 ms