Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Olfr687-201ENSMUST00000098154 938 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm44255-201ENSMUST00000203456 2053 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 AC154552.6-201ENSMUST00000221365 1342 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm11343-201ENSMUST00000120579 599 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm11910-201ENSMUST00000121624 432 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Snora47-201ENSMUST00000157483 138 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm21392-201ENSMUST00000182950 972 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm29519-201ENSMUST00000186994 398 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm19231-201ENSMUST00000193212 830 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm19182-201ENSMUST00000207139 577 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm18467-201ENSMUST00000208805 434 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Gm16020-201ENSMUST00000084281 210 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.23□□□□□ -1.09
NpcdF8VQB8 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.23□□□□□ -1.09
NpcdF8VQB8 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NpcdF8VQB8 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm42736-201ENSMUST00000200723 1353 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Rnu11-201ENSMUST00000104135 134 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 Snora35-201ENSMUST00000104579 128 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm24002-201ENSMUST00000158456 104 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC8.22□□□□□ -1.09
NpcdF8VQB8 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NpcdF8VQB8 Gm18700-201ENSMUST00000185791 553 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms