Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm17060-201ENSMUST00000172394 824 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Mir378d-201ENSMUST00000184232 110 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm9419-201ENSMUST00000200672 567 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm44449-201ENSMUST00000203610 153 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm45725-201ENSMUST00000212962 337 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm25404-201ENSMUST00000082970 107 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm23242-201ENSMUST00000083055 107 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm25578-201ENSMUST00000083406 104 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm24608-201ENSMUST00000104381 136 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Mir190b-201ENSMUST00000104803 80 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm12386-201ENSMUST00000117380 688 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm14197-201ENSMUST00000117480 1049 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm16383-201ENSMUST00000118122 232 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm12717-201ENSMUST00000118427 983 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm14869-201ENSMUST00000119007 884 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm12262-201ENSMUST00000119915 305 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm13940-201ENSMUST00000121023 301 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm13489-201ENSMUST00000121234 971 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm23149-201ENSMUST00000158837 230 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm17919-201ENSMUST00000173344 312 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Mir7058-201ENSMUST00000184637 75 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm29357-201ENSMUST00000186877 698 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm28956-201ENSMUST00000189047 427 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm7142-201ENSMUST00000194232 586 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm43656-201ENSMUST00000197882 434 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm43926-201ENSMUST00000203978 430 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm9604-201ENSMUST00000211175 433 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm45782-201ENSMUST00000212670 366 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 AC166323.1-201ENSMUST00000217756 367 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Ap3m1-208ENSMUST00000224016 764 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm24924-201ENSMUST00000084007 164 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms