Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm6427-201ENSMUST00000118721 979 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm15044-201ENSMUST00000120703 598 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm4831-201ENSMUST00000174626 594 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm19936-201ENSMUST00000216414 838 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm23537-201ENSMUST00000157536 330 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm26310-201ENSMUST00000157766 117 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Mir6933-201ENSMUST00000184982 81 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm8523-201ENSMUST00000211386 552 ntBASIC6.03□□□□□ -1.44
Cdh23Q99PF4 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.02□□□□□ -1.44
Cdh23Q99PF4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm24160-201ENSMUST00000104594 126 ntBASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm44213-201ENSMUST00000204977 703 ntBASIC6.02□□□□□ -1.45
Cdh23Q99PF4 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Cdh23Q99PF4 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm23750-201ENSMUST00000104222 132 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm15186-201ENSMUST00000119345 563 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm22276-201ENSMUST00000122469 129 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm25224-201ENSMUST00000158195 68 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm24217-201ENSMUST00000158260 133 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm37308-201ENSMUST00000194684 100 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm4822-201ENSMUST00000077551 479 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm13681-201ENSMUST00000117925 210 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm26098-201ENSMUST00000157247 288 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 AC165260.6-204ENSMUST00000225571 3508 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms