Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 AC140451.1-201ENSMUST00000227984 737 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm10247-201ENSMUST00000090395 333 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.47□□□□□ -1.21
Ccdc9Q8VC31 AC153494.1-201ENSMUST00000218664 3041 ntBASIC7.46□□□□□ -1.21
Ccdc9Q8VC31 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ccdc9Q8VC31 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ccdc9Q8VC31 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Ccdc9Q8VC31 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ccdc9Q8VC31 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ccdc9Q8VC31 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Ccdc9Q8VC31 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
Ccdc9Q8VC31 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm25757-201ENSMUST00000103986 123 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm23631-201ENSMUST00000175291 123 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm28801-201ENSMUST00000188761 449 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm37511-201ENSMUST00000192901 294 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm43655-201ENSMUST00000197367 222 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm3549-201ENSMUST00000203873 794 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm44590-201ENSMUST00000206161 391 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm6667-201ENSMUST00000217169 564 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm18908-201ENSMUST00000207125 1483 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 AC121942.1-201ENSMUST00000224459 2891 ntBASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ccdc9Q8VC31 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm42725-201ENSMUST00000199296 4193 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm26016-201ENSMUST00000104403 129 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm15105-201ENSMUST00000117777 204 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm21803-201ENSMUST00000188897 693 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm29496-201ENSMUST00000189854 693 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm28567-201ENSMUST00000190270 693 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm28070-201ENSMUST00000191502 445 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm37044-201ENSMUST00000193531 693 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm36943-201ENSMUST00000194422 282 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm38369-201ENSMUST00000195101 693 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm44258-201ENSMUST00000204925 301 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 AC154627.3-201ENSMUST00000228441 334 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Olfr1153-201ENSMUST00000052300 957 ntBASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ccdc9Q8VC31 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms