Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim9Q8C7M3 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
Trim9Q8C7M3 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm13176-201ENSMUST00000117910 477 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm2619-202ENSMUST00000166777 651 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm37135-201ENSMUST00000192652 534 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm42708-201ENSMUST00000196332 905 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm43850-201ENSMUST00000202021 578 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm6590-201ENSMUST00000203343 687 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm45448-201ENSMUST00000211739 209 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm5321-201ENSMUST00000072050 447 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm43341-201ENSMUST00000200104 1308 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim9Q8C7M3 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm37965-201ENSMUST00000195304 1362 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm42968-201ENSMUST00000198578 1372 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm14294-201ENSMUST00000119749 751 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm11370-201ENSMUST00000120583 260 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm12978-201ENSMUST00000121250 522 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm16269-201ENSMUST00000160532 409 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm37265-201ENSMUST00000191698 885 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm4332-201ENSMUST00000196114 346 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm44849-201ENSMUST00000207595 484 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Gm18043-201ENSMUST00000216741 739 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.88□□□□□ -1.31
Trim9Q8C7M3 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim9Q8C7M3 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms