Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm17934-201ENSMUST00000192818 422 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm37758-201ENSMUST00000194275 629 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm19739-201ENSMUST00000195941 153 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm3266-201ENSMUST00000217832 591 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.61□□□□□ -1.35
Upf3bQ3ULL6 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm14294-201ENSMUST00000119749 751 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm11925-201ENSMUST00000121375 535 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm16102-201ENSMUST00000160955 420 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm24300-201ENSMUST00000177809 109 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm24017-201ENSMUST00000178726 109 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm23952-201ENSMUST00000179380 109 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm28586-201ENSMUST00000189857 456 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm43233-201ENSMUST00000200491 616 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm44243-201ENSMUST00000204323 692 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm19154-201ENSMUST00000223330 940 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm5321-201ENSMUST00000072050 447 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.6□□□□□ -1.35
Upf3bQ3ULL6 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm14375-201ENSMUST00000119490 855 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Gm8860-201ENSMUST00000193160 445 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.59□□□□□ -1.35
Upf3bQ3ULL6 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms