Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm27825-201ENSMUST00000184586 60 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm9127-201ENSMUST00000188041 985 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm43048-201ENSMUST00000196101 388 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm9367-201ENSMUST00000205703 546 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm45626-201ENSMUST00000210093 361 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm7351-201ENSMUST00000210745 580 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm5928-201ENSMUST00000221839 466 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm26340-201ENSMUST00000102365 99 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm6654-201ENSMUST00000118950 348 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm14998-201ENSMUST00000120502 495 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm11370-201ENSMUST00000120583 260 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm4152-201ENSMUST00000172675 259 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm22701-201ENSMUST00000175371 291 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm44370-201ENSMUST00000175436 112 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm27853-201ENSMUST00000184176 250 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm4556-201ENSMUST00000217808 355 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.56□□□□□ -1.36
Trim43aQ3TL54 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim43aQ3TL54 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Gm12713-201ENSMUST00000118404 764 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Gm11920-201ENSMUST00000118491 563 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Gm3140-201ENSMUST00000163523 481 ntBASIC6.55□□□□□ -1.36
Trim43aQ3TL54 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms