Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28886-202ENSMUST00000187889 484 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28554-202ENSMUST00000189175 484 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29213-202ENSMUST00000189703 484 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28851-202ENSMUST00000189757 484 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28461-201ENSMUST00000190023 484 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC9.62□□□□□ -0.87
Col17a1Q07563 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm4714-201ENSMUST00000203395 279 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC9.62□□□□□ -0.87
Col17a1Q07563 AC132384.3-201ENSMUST00000219709 472 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 AC102542.1-201ENSMUST00000225204 1138 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm26130-201ENSMUST00000083171 138 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Col17a1Q07563 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm10693-201ENSMUST00000144146 2037 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm43788-201ENSMUST00000201539 2417 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Gm38276-201ENSMUST00000192446 1343 ntBASIC9.62□□□□□ -0.87
Col17a1Q07563 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm18719-201ENSMUST00000196696 1413 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm15971-201ENSMUST00000119372 211 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm14563-201ENSMUST00000120571 354 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm21399-201ENSMUST00000180210 597 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 Mir7074-201ENSMUST00000183884 63 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm28925-201ENSMUST00000188586 168 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm45731-201ENSMUST00000211988 1203 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm10709-201ENSMUST00000213318 480 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Col17a1Q07563 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm37217-201ENSMUST00000194017 3521 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm7048-201ENSMUST00000199395 1891 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Col17a1Q07563 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col17a1Q07563 Gm20121-201ENSMUST00000198547 1594 ntBASIC9.61□□□□□ -0.87
Col17a1Q07563 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms