Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 AC154573.1-201ENSMUST00000225913 4659 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Hmgb1P63158 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm42841-201ENSMUST00000199806 1932 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm26079-201ENSMUST00000104066 133 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm7091-201ENSMUST00000116438 586 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm11462-201ENSMUST00000117749 562 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm13265-201ENSMUST00000118090 421 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm12104-201ENSMUST00000120359 979 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm7113-201ENSMUST00000120477 958 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm12001-201ENSMUST00000121727 913 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm22523-201ENSMUST00000158696 100 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm16113-201ENSMUST00000159629 372 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm8582-201ENSMUST00000164061 789 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm7651-201ENSMUST00000173398 901 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm3585-201ENSMUST00000173438 875 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm21909-201ENSMUST00000178260 439 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Hmgb1P63158 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm27976-201ENSMUST00000183635 162 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm27985-201ENSMUST00000185112 378 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm5244-202ENSMUST00000189517 743 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm37491-201ENSMUST00000192552 1111 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Trbv28-201ENSMUST00000192804 264 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm42804-201ENSMUST00000199701 178 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm9419-201ENSMUST00000200672 567 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm17918-201ENSMUST00000205315 574 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.36□□□□□ -1.23
Hmgb1P63158 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.36□□□□□ -1.23
Hmgb1P63158 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC7.36□□□□□ -1.23
Hmgb1P63158 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmgb1P63158 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 CT009757.5-201ENSMUST00000221858 3425 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm15310-201ENSMUST00000117891 372 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm14870-201ENSMUST00000118414 156 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm15493-201ENSMUST00000119461 528 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm16357-201ENSMUST00000144091 474 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm22084-201ENSMUST00000157585 105 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm23179-201ENSMUST00000158693 304 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm20615-201ENSMUST00000177503 705 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms