Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cux1P53564 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cux1P53564 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Cux1P53564 Gm38381-201ENSMUST00000193594 2275 ntBASIC9.44□□□□□ -0.9
Cux1P53564 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Gm43343-201ENSMUST00000202454 1926 ntBASIC9.44□□□□□ -0.9
Cux1P53564 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Gm18313-201ENSMUST00000221036 1784 ntBASIC9.44□□□□□ -0.9
Cux1P53564 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC9.44□□□□□ -0.9
Cux1P53564 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cux1P53564 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cux1P53564 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Gm14842-201ENSMUST00000119577 269 ntBASIC9.44□□□□□ -0.9
Cux1P53564 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC9.44□□□□□ -0.9
Cux1P53564 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC9.44□□□□□ -0.9
Cux1P53564 Gm37196-201ENSMUST00000194762 906 ntBASIC9.44□□□□□ -0.9
Cux1P53564 Gm31166-201ENSMUST00000209326 288 ntBASIC9.44□□□□□ -0.9
Cux1P53564 Gm33601-201ENSMUST00000210001 961 ntBASIC9.44□□□□□ -0.9
Cux1P53564 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC9.44□□□□□ -0.9
Cux1P53564 AC156802.1-201ENSMUST00000223623 579 ntBASIC9.44□□□□□ -0.9
Cux1P53564 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC9.44□□□□□ -0.9
Cux1P53564 Gm6776-201ENSMUST00000057752 900 ntBASIC9.44□□□□□ -0.9
Cux1P53564 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cux1P53564 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cux1P53564 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Cux1P53564 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cux1P53564 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cux1P53564 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cux1P53564 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Cux1P53564 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 AC154841.1-201ENSMUST00000227263 1479 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Gm26078-201ENSMUST00000104067 128 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Cux1P53564 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Cux1P53564 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC9.43□□□□□ -0.9
Cux1P53564 Gm15970-201ENSMUST00000160623 834 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Gm4617-201ENSMUST00000178993 331 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Gm29650-201ENSMUST00000188485 742 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Gm28428-201ENSMUST00000188886 697 ntBASIC9.43□□□□□ -0.9
Cux1P53564 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC9.43□□□□□ -0.9
Cux1P53564 Gm45249-201ENSMUST00000211021 348 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Gm8412-201ENSMUST00000077493 440 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cux1P53564 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cux1P53564 Gm8750-201ENSMUST00000173278 1537 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Gm37186-201ENSMUST00000195629 2861 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC9.43□□□□□ -0.9
Cux1P53564 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cux1P53564 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cux1P53564 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cux1P53564 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC9.43□□□□□ -0.9
Cux1P53564 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cux1P53564 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cux1P53564 Gm14106-201ENSMUST00000119382 438 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Gm12308-201ENSMUST00000120440 389 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Gm13740-201ENSMUST00000120590 310 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Gm13899-201ENSMUST00000121519 1255 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC9.42□□□□□ -0.9
Cux1P53564 Gm26172-201ENSMUST00000158421 134 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cux1P53564 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cux1P53564 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cux1P53564 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Gm29159-201ENSMUST00000187969 379 ntBASIC9.42□□□□□ -0.9
Cux1P53564 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cux1P53564 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cux1P53564 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cux1P53564 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cux1P53564 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Cux1P53564 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC9.42□□□□□ -0.9
Cux1P53564 Gm7108-201ENSMUST00000118038 3407 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Gm44068-201ENSMUST00000204049 2128 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cux1P53564 Gm42881-201ENSMUST00000198636 3344 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cux1P53564 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cux1P53564 Gm9894-201ENSMUST00000171257 2904 ntBASIC9.42□□□□□ -0.9
Cux1P53564 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cux1P53564 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cux1P53564 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cux1P53564 Gm37364-201ENSMUST00000192533 3920 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms