Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.85□□□□□ -1.31
Shmt1P50431 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Shmt1P50431 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.84□□□□□ -1.31
Shmt1P50431 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
Shmt1P50431 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm24272-201ENSMUST00000102329 98 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Shmt1P50431 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Shmt1P50431 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Shmt1P50431 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm4911-201ENSMUST00000119388 945 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Gm6977-201ENSMUST00000121568 512 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Gm15529-201ENSMUST00000121833 994 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm26254-201ENSMUST00000122491 118 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm11545-201ENSMUST00000146507 375 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Gm23386-201ENSMUST00000158585 144 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Mir7669-201ENSMUST00000183442 58 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Gm27853-201ENSMUST00000184176 250 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Mir6337-201ENSMUST00000184194 105 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Gm27998-201ENSMUST00000184902 361 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Gm18805-201ENSMUST00000206872 655 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm7688-201ENSMUST00000212857 337 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Shmt1P50431 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm6990-201ENSMUST00000086830 348 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm10780-201ENSMUST00000099459 285 ntBASIC6.84□□□□□ -1.31
Shmt1P50431 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
Shmt1P50431 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shmt1P50431 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.84□□□□□ -1.32
Shmt1P50431 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.84□□□□□ -1.32
Shmt1P50431 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.32
Shmt1P50431 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.84□□□□□ -1.32
Shmt1P50431 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Shmt1P50431 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Shmt1P50431 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.83□□□□□ -1.32
Shmt1P50431 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.83□□□□□ -1.32
Shmt1P50431 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Shmt1P50431 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Shmt1P50431 Mir669p-2-201ENSMUST00000103868 87 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Mir669p-1-201ENSMUST00000103884 87 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm25346-201ENSMUST00000104509 128 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms