Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC8.33□□□□□ -1.08
Col18a1P39061 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC8.33□□□□□ -1.08
Col18a1P39061 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm28926-201ENSMUST00000191063 680 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col18a1P39061 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC8.33□□□□□ -1.08
Col18a1P39061 Gm21089-201ENSMUST00000215843 325 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC8.33□□□□□ -1.08
Col18a1P39061 AC158392.1-201ENSMUST00000223720 1069 ntBASIC8.33□□□□□ -1.08
Col18a1P39061 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col18a1P39061 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Col18a1P39061 AC140299.2-201ENSMUST00000219546 1969 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Col18a1P39061 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Col18a1P39061 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm7155-201ENSMUST00000121143 1671 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm10062-201ENSMUST00000072180 1470 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Col18a1P39061 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Col18a1P39061 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm12303-201ENSMUST00000119506 673 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 Mup-ps10-201ENSMUST00000119626 556 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm4540-201ENSMUST00000170669 429 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm20574-201ENSMUST00000182867 917 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 Mir6343-201ENSMUST00000183584 84 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 Mir6417-201ENSMUST00000183815 116 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.32□□□□□ -1.08
Col18a1P39061 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC8.32□□□□□ -1.08
Col18a1P39061 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC8.32□□□□□ -1.08
Col18a1P39061 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC8.32□□□□□ -1.08
Col18a1P39061 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC8.32□□□□□ -1.08
Col18a1P39061 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC8.32□□□□□ -1.08
Col18a1P39061 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col18a1P39061 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col18a1P39061 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col18a1P39061 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col18a1P39061 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col18a1P39061 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms