Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm29476-201ENSMUST00000188397 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29505-201ENSMUST00000188424 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28125-201ENSMUST00000188470 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29391-201ENSMUST00000188545 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29280-201ENSMUST00000188571 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28349-201ENSMUST00000188590 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29652-201ENSMUST00000188622 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28819-206ENSMUST00000188816 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29079-201ENSMUST00000188875 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28213-201ENSMUST00000189183 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29382-201ENSMUST00000189549 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29377-205ENSMUST00000189603 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28327-201ENSMUST00000189638 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28790-201ENSMUST00000189642 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28907-201ENSMUST00000189700 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29586-207ENSMUST00000189745 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29115-201ENSMUST00000189870 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28366-201ENSMUST00000190147 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29212-201ENSMUST00000190384 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29533-201ENSMUST00000190403 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28162-201ENSMUST00000190545 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29030-201ENSMUST00000190848 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28742-201ENSMUST00000191001 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28899-201ENSMUST00000191161 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29567-201ENSMUST00000191188 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28222-201ENSMUST00000191210 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28776-201ENSMUST00000191282 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29306-201ENSMUST00000191366 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29618-201ENSMUST00000191423 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28136-210ENSMUST00000191432 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm29251-201ENSMUST00000191480 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm28658-201ENSMUST00000191532 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm32180-201ENSMUST00000192415 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm30598-201ENSMUST00000192620 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm7019-201ENSMUST00000194122 369 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm37627-201ENSMUST00000194585 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm34274-201ENSMUST00000195825 615 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdx1P18111 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.15□□□□□ -1.59
Cdx1P18111 AV026068-219ENSMUST00000224148 933 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdx1P18111 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdx1P18111 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
Cdx1P18111 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.15□□□□□ -1.59
Cdx1P18111 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.15□□□□□ -1.59
Cdx1P18111 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx1P18111 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Cdx1P18111 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdx1P18111 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Cdx1P18111 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cdx1P18111 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cdx1P18111 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm15203-201ENSMUST00000117668 455 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm5601-201ENSMUST00000118909 972 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm11976-201ENSMUST00000119236 295 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm12175-201ENSMUST00000122081 345 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm14353-201ENSMUST00000122200 869 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm12504-202ENSMUST00000148026 306 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm25969-201ENSMUST00000157166 132 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm23756-201ENSMUST00000157582 114 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Mir6362-201ENSMUST00000184329 107 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm8502-201ENSMUST00000185708 901 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm21147-201ENSMUST00000186046 913 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm2860-201ENSMUST00000199226 707 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms