Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 Gm26323-201ENSMUST00000157743 175 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.25□□□□□ -1.41
Lire1P11260 Gm6726-201ENSMUST00000172786 681 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Gm24812-201ENSMUST00000175315 284 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.25□□□□□ -1.41
Lire1P11260 Gm27018-201ENSMUST00000181136 225 ntBASIC6.25□□□□□ -1.41
Lire1P11260 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Lire1P11260 Gm3605-201ENSMUST00000185858 440 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 Gm37439-201ENSMUST00000193150 856 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Gm37322-201ENSMUST00000193409 337 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 Gm4860-201ENSMUST00000200368 454 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC6.25□□□□□ -1.41
Lire1P11260 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.25□□□□□ -1.41
Lire1P11260 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.25□□□□□ -1.41
Lire1P11260 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.25□□□□□ -1.41
Lire1P11260 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Lire1P11260 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Gm5528-201ENSMUST00000076314 480 ntBASIC6.25□□□□□ -1.41
Lire1P11260 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Lire1P11260 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.25□□□□□ -1.41
Lire1P11260 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Lire1P11260 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Lire1P11260 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lire1P11260 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Lire1P11260 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 Gm26144-201ENSMUST00000104475 132 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Lire1P11260 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.24□□□□□ -1.41
Lire1P11260 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.24□□□□□ -1.41
Lire1P11260 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.24□□□□□ -1.41
Lire1P11260 Gm13196-201ENSMUST00000118297 379 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm12740-201ENSMUST00000118794 308 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm11866-201ENSMUST00000120209 335 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm8722-201ENSMUST00000121466 769 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm11609-201ENSMUST00000121926 793 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm14251-201ENSMUST00000122133 279 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm25178-201ENSMUST00000122633 325 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.24□□□□□ -1.41
Lire1P11260 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Gm25556-201ENSMUST00000158077 144 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm4613-201ENSMUST00000165488 276 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.24□□□□□ -1.41
Lire1P11260 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm8861-201ENSMUST00000196346 832 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Lire1P11260 Gm44374-201ENSMUST00000199821 140 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm9357-201ENSMUST00000207138 805 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm2975-201ENSMUST00000209710 820 ntBASIC6.24□□□□□ -1.41
Lire1P11260 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC6.24□□□□□ -1.41
Lire1P11260 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.24□□□□□ -1.41
Lire1P11260 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms